Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCTGGGCGAGGCTGGCA&CATGCCTTGTTCAT
..((((((((((..(..&)..)))))))))).
Details
MiRNAhsa-miR-4486
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2515,2529
Score0.846
Seed1
Au0.706
Energy-15.2
Binding len14
Me-7.336
Phylopstem4.630772970000001
Phylopflank4.4058684975
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure