Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGCTGGCTGAAGGGCAG&CTGCGCGGCCGCCGGCG
...((((((.(..(.((((&)))).)..).)))))).
Details
MiRNAhsa-miR-4487
RefseqIDNM_004362
GeneSymbolCLGN
Binding site11,28
Score0.846
Seed0
Au0.298
Energy-20.7
Binding len17
Me-13.128
Phylopstem0.5935593833333332
Phylopflank0.22057037522727274
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure