Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGCTGGCTGAAGGGCAG&CTGCTGGCTGGCTTG
.(((((((((....(((((&)))))))))))))).
Details
MiRNAhsa-miR-4487
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1052,1067
Score1.0
Seed1
Au0.603
Energy-17.2
Binding len15
Me-12.111
Phylopstem4.569918888888889
Phylopflank5.07521165
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure