Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGGGCGGGCTCCGGCG&TGCCGTCAAACCAGAAGACTGGGATGAAAGTGAACCTGCCCA
...(((((((.(((((((&)))))..........................)).))))))).
Details
MiRNAhsa-miR-4488
RefseqIDNM_004362
GeneSymbolCLGN
Binding site984,1026
Score1.0
Seed0
Au0.574
Energy-19.4
Binding len42
Me-9.339
Phylopstem4.723567212121211
Phylopflank5.27207443125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure