Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCTAGTGATGCAGGACG&TGTTAAACCTGCTGGCTGGCTTGAT
(.((((((((.(.(((((...&.)))))).)))))))).).
Details
MiRNAhsa-miR-4489
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1044,1069
Score0.923
Seed1
Au0.603
Energy-21.4
Binding len19
Me-9.215
Phylopstem4.890790125
Phylopflank5.0880783874999995
Longest consecutive pairings8
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure