Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAAGGCCTTTCCATCTCTGT&GGAGATGGAAAATAATGATAGCAAATGCTAATAAGCCTG
...((((.(((((((((((..&))))))))))).......................)))).
Details
MiRNAhsa-miR-4493
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1451,1490
Score1.0
Seed0
Au0.632
Energy-18.0
Binding len39
Me-8.828
Phylopstem4.276137636363637
Phylopflank2.9733510725
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end6
PositionCDS
2D Structure