Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGCTTGGATGAGCTGGGCTGA&TCAGTCTGCACATCCTGTTTC
((((..(((((.((.(((((((&))))))))).))))).)))).
Details
MiRNAhsa-miR-4538
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2031,2052
Score0.923
Seed0
Au0.632
Energy-19.6
Binding len21
Me-14.04
Phylopstem5.649512857142857
Phylopflank3.609397445
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure