Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAGTCCTGCCTGTAGGTTTA&GGCCGCCGGCGGGACTGGT
(((((((((((.((.((((..&)))))).))))))))))).
Details
MiRNAhsa-miR-4540
RefseqIDNM_004362
GeneSymbolCLGN
Binding site17,36
Score0.923
Seed1
Au0.308
Energy-23.2
Binding len19
Me-8.02
Phylopstem0.022259754545454487
Phylopflank0.3835388207142858
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure