Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACTCGGCTGCGGTGGACAAGT&CTTGTTCATAAAATCACTGGATTATATTGCAGCA
.....(((((((((((((((.&)))))))))..................)))))).
Details
MiRNAhsa-miR-4638-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2520,2554
Score0.846
Seed0
Au0.691
Energy-17.4
Binding len34
Me-13.666
Phylopstem4.933549233333332
Phylopflank4.48083701
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end7
Position3UTR
2D Structure