Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGCCAGGGAGCAGCTGGTGGG&CCGCCGGCGGGACTGGTCTG
.(((((((....(.((((((((.&)))))))).)..))))))).
Details
MiRNAhsa-miR-4640-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site19,39
Score0.923
Seed1
Au0.309
Energy-26.8
Binding len20
Me-13.121
Phylopstem0.8506432875
Phylopflank0.2644277191666667
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position5UTR
2D Structure