Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGCCAGGGAGCAGCTGGTGGG&CCTGGTGTATTAAAACAGTTAATGGCAGCTGCTGAAGGGCACCCATGGCTTT
.(((((((((((((((((.(...&.).))))))))........))).)))))).
Details
MiRNAhsa-miR-4640-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1486,1538
Score0.923
Seed1
Au0.515
Energy-26.0
Binding len30
Me-3.793
Phylopstem3.2813187153846153
Phylopflank3.4595334875
Longest consecutive pairings8
Position of longest consecutive pairings19
Pairings in 3prime end4
PositionCDS
2D Structure