Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATGTGGAAGTGGTCTGAGGCAT&CCTCAGATTCTTAATCCAGCATG
.(((((((((.(((((((((...&)))))))))))...)))).))).
Details
MiRNAhsa-miR-4657
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1150,1173
Score0.846
Seed1
Au0.485
Energy-18.2
Binding len23
Me-6.618
Phylopstem3.770931333333334
Phylopflank3.7779442575
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure