Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTAGCCAATTGTCCATCTTTAG&GAGAGGGATGTTTGGCA
...(((((.(((((.((((...&)))).))))).))))).
Details
MiRNAhsa-miR-4662a-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1980,1997
Score0.846
Seed0
Au0.618
Energy-16.9
Binding len17
Me-8.306
Phylopstem1.8373282000000004
Phylopflank3.5871744100000003
Longest consecutive pairings5
Position of longest consecutive pairings7
Pairings in 3prime end4
Position3UTR
2D Structure