Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATACAATCTGACATGTATTT&GAATGGGAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGT
(((.(((((((((((((....&.))))))))))))).))).
Details
MiRNAhsa-miR-4666a-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1138,1186
Score0.923
Seed0
Au0.529
Energy-21.7
Binding len19
Me-6.97
Phylopstem2.0671487692307693
Phylopflank3.9234333937500008
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end4
PositionCDS
2D Structure