Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACGGGAATGCAGGCTGTATCT&AGCATGCCAGACCTGAACTTTAATCAGTCTGCACATCCTGTTT
(((((((.(((((((((.....&.)))))))))..))))))).
Details
MiRNAhsa-miR-4681
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2008,2051
Score0.923
Seed1
Au0.647
Energy-22.7
Binding len20
Me-6.251
Phylopstem3.2069174444444446
Phylopflank3.2413027925
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end3
Position3UTR
2D Structure