Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCCAGGGCTTGGAGTGGGGCAAGGTT&GACTTGGACATCTGAGCTGTCACTGCCGAAAACAGGCCGCAAGAGAGATAATCAATATGCATTTCCAAGCCTTTTGGCTATGTTTGGGT
((((((((((((((((.(((..(((.&.)))........))).)).....................))))))))))............)))).
Details
MiRNAhsa-miR-4685-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site65,154
Score0.923
Seed1
Au0.647
Energy-25.7
Binding len66
Me-3.938
Phylopstem0.36115300612244894
Phylopflank1.0112119112500002
Longest consecutive pairings10
Position of longest consecutive pairings17
Pairings in 3prime end5
Position5UTR
2D Structure