Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATCTGCTGGGCTTTCTGGTGTT&ACCAGAAGACTGGGATGAAAGTGAACCTGCCCAAATAGAA
..((((.(((((((((((((...&))))))))....................)))))..)))).
Details
MiRNAhsa-miR-4686
RefseqIDNM_004362
GeneSymbolCLGN
Binding site993,1033
Score0.846
Seed0
Au0.544
Energy-17.7
Binding len40
Me-6.501
Phylopstem4.484429545454546
Phylopflank4.99514936875
Longest consecutive pairings8
Position of longest consecutive pairings32
Pairings in 3prime end5
PositionCDS
2D Structure