Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGCAGGCGAGGCTGGGCTGAA&GCGCGGCCGCCGGCG
..((.(((..(((((.((....&)).)))))))).)).
Details
MiRNAhsa-miR-4690-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site13,28
Score0.846
Seed0
Au0.298
Energy-21.1
Binding len15
Me-11.608
Phylopstem0.5402373199999999
Phylopflank0.18793696333333337
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end3
Position5UTR
2D Structure