Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGCCACCACACCTACCCCTT&GAGGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTGTGGTGAGTGGAA
((.(((((((((((((..((..&.))..))))))))))).)).)).
Details
MiRNAhsa-miR-4701-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1144,1197
Score0.846
Seed0
Au0.559
Energy-25.9
Binding len23
Me-5.495
Phylopstem3.6027364285714287
Phylopflank3.9895735075
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end4
PositionCDS
2D Structure