Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGCTCCAGGTGACGGTGG&CCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTCGA
((((((((((((((..((((((&))))))........................)))))))))))))).
Details
MiRNAhsa-miR-4721
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1243,1288
Score0.846
Seed1
Au0.618
Energy-30.2
Binding len45
Me-4.906
Phylopstem3.153339857142857
Phylopflank4.19926313375
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure