Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCCCAATGCTAGACCCGGTG&CACTGGGCTGCAGATGGTTGGAGATG
.((((((((((.((.(((((((&)))))))))))).....)))).))).
Details
MiRNAhsa-miR-4733-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1432,1458
Score0.808
Seed1
Au0.574
Energy-20.7
Binding len26
Me-7.876
Phylopstem5.493369875
Phylopflank2.51218152
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end7
PositionCDS
2D Structure