Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGAGGAGGAGCGGAGGGGCCCT&AGGTGTTAGTTGATCAAACAGTTGTAAACAAAGGAAGCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCA
..((((((..((..(((((((((..&.)))))))))..))...)))))).
Details
MiRNAhsa-miR-4739
RefseqIDNM_004362
GeneSymbolCLGN
Binding site839,914
Score0.923
Seed1
Au0.588
Energy-30.4
Binding len24
Me-9.402
Phylopstem4.463778555555555
Phylopflank4.301427661250001
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure