Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGAAGGAGGCTTGGTCTTAG&AAGCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCA
.(((((((((((((........&)))))))))...........................)))).
Details
MiRNAhsa-miR-4747-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site873,914
Score0.846
Seed1
Au0.588
Energy-19.2
Binding len41
Me-4.762
Phylopstem4.837744992499999
Phylopflank4.862300347500001
Longest consecutive pairings9
Position of longest consecutive pairings32
Pairings in 3prime end0
PositionCDS
2D Structure