Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGGAGATCCAGAGAGAAT&TCAATATGCATTTCCAAGCCTTTTGGCTATGTTTGGGTCTTCTGT
.(((((((((((((.(....&.).))))))))))))).
Details
MiRNAhsa-miR-4768-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site116,161
Score1.0
Seed1
Au0.632
Energy-19.6
Binding len17
Me-4.529
Phylopstem0.6726620923076924
Phylopflank0.90901567125
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure