Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGGAAGAAGTGGACAA&GATTATTTCGAAGATGATCATCCATTTCTTCTGACTTCTTTCAGTGCTCTT
.((((((((((((((((((...&.))))))))))))............)))))).
Details
MiRNAhsa-miR-4436b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1303,1354
Score0.846
Seed1
Au0.588
Energy-21.8
Binding len32
Me-3.793
Phylopstem3.630822433333333
Phylopflank3.2836706975000003
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end5
PositionCDS
2D Structure