Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGATGATCTAAAGGCCTATA&GGTCTGAAGAGACGCGGGGACCAAGTGGCAACGACTTGGACATCTGAG
(((((((.((((((((((....&)))))..............................)))))))))))).
Details
MiRNAhsa-miR-1245b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site33,81
Score0.923
Seed1
Au0.412
Energy-16.7
Binding len48
Me-6.251
Phylopstem0.3688487600000001
Phylopflank0.26564150141304343
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure