Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCTAAATGCAGCATGCCAGTC&TGGCAGCTGCTGAAGGGC
.(((....(((((.(((((...&))))))))))....))).
Details
MiRNAhsa-miR-4799-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1508,1526
Score0.846
Seed0
Au0.559
Energy-17.7
Binding len18
Me-14.527
Phylopstem3.3938758
Phylopflank3.1015408525000003
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure