Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCCGTCCGTCTGTCCAC&TGGGTCAGAGGATGAGATGA
(((((((((.((((((((.&)))).))))))))).)))).
Details
MiRNAhsa-miR-4800-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1857,1877
Score0.923
Seed1
Au0.574
Energy-21.1
Binding len20
Me-5.18
Phylopstem3.25011676
Phylopflank4.0402834187500005
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure