Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATCCGTCCGTCTGTCCAC&TGGAATGAAGACACGGATGGAG
..((((((((((..((((.&))))..)).....)))))))).
Details
MiRNAhsa-miR-4800-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1117,1139
Score0.923
Seed1
Au0.544
Energy-17.9
Binding len22
Me-7.103
Phylopstem3.029260706666667
Phylopflank3.7715638874999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure