Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACACAAGAAAACCAAGGCTCA&TGAAGGGCACCCATGGCTTTGGTTGATTTATCTTGTGA
..(((((((.((((((((((..&.))))))))))......))))))).
Details
MiRNAhsa-miR-4801
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1518,1556
Score0.923
Seed1
Au0.559
Energy-19.9
Binding len25
Me-6.2
Phylopstem3.6690154
Phylopflank3.0424923649999993
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure