Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGCTGGACTCAGCGGCGGAGCT&GCGGCCGCCGGCGGGACTGGTCTG
.(((((((.(((..((((((.((.&))..))))))..))).))))))).
Details
MiRNAhsa-miR-5001-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site15,39
Score0.923
Seed1
Au0.309
Energy-27.3
Binding len24
Me-6.996
Phylopstem0.05490571428571427
Phylopflank0.43599855285714284
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure