Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTGCCTCTGTCCAGGTCCTT&GGACCTGGAAGAGGA
.....(((((.(((((((((..&)))))))))))))).
Details
MiRNAhsa-miR-5001-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1722,1737
Score1.0
Seed0
Au0.574
Energy-26.5
Binding len15
Me-16.49
Phylopstem2.7499037777777775
Phylopflank3.98705710625
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure