Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCTGCCTCTGTCCAGGTCCTT&AGGATCTGGAGATGGGCCGAT
.((.((((.(.((((((((((.&)))))))))).).)))).)).
Details
MiRNAhsa-miR-5001-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1896,1917
Score1.0
Seed0
Au0.529
Energy-25.9
Binding len21
Me-10.707
Phylopstem2.1188066
Phylopflank4.79661982125
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure