Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATTTGGTTTCTGAGGCACTTAGT&GTGAACTTTCCTCAGAGATTAAATA
.(((((((((((((((........&.))))))))))))))).
Details
MiRNAhsa-miR-5002-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site248,273
Score1.0
Seed1
Au0.676
Energy-19.0
Binding len17
Me-3.793
Phylopstem2.2350681666666663
Phylopflank2.2341770937499996
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure