Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCACAACAACCTTGCAGGGTAGA&TCTGTTGTGAAGAGCTAAATGCAATAAAGTTTCTGTATGGTTGTTTGAT
(((.(((((((.(((((((....&.))))))).)))))))))).
Details
MiRNAhsa-miR-5003-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2362,2411
Score0.904
Seed0
Au0.706
Energy-18.2
Binding len20
Me-10.316
Phylopstem2.1945293571428572
Phylopflank4.2317703375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure