Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACTTTTCTAGGTTGTTGGGG&CCCTGGAAAAACCAATGGACCTGGAAGAGG
..((((((((((((.((((..&.))))..)))))))))))).
Details
MiRNAhsa-miR-5003-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1706,1736
Score0.923
Seed1
Au0.588
Energy-22.1
Binding len20
Me-5.692
Phylopstem3.0984052500000003
Phylopflank3.8395098
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure