Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGACAGGGCAAATTCACGA&GGACATGCCTTGTTCA
...((((((((((..(((....&)))..)))))))))).
Details
MiRNAhsa-miR-5004-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2512,2528
Score1.0
Seed0
Au0.691
Energy-18.0
Binding len16
Me-8.107
Phylopstem5.03911297
Phylopflank4.643535247499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure