Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCCAGGGCAGGAGGTGGAA&TCCATTTCTTCTGACTTCTTTCAGTGCTCTTGGTT
..((((((((((((((((((.&)))))))))...............))).)))))).
Details
MiRNAhsa-miR-5006-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1323,1358
Score0.923
Seed1
Au0.603
Energy-20.2
Binding len35
Me-4.957
Phylopstem3.023836829411765
Phylopflank3.3152565175
Longest consecutive pairings9
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure