Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTCCCTTTCCATCCTGGCAG&GCACAGGATCTGGAGATGGGC
...((((((((((((((((..&)).)))))..)))))).))).
Details
MiRNAhsa-miR-5006-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1892,1913
Score0.923
Seed0
Au0.544
Energy-21.7
Binding len21
Me-6.515
Phylopstem2.3695600999999993
Phylopflank4.648991500000001
Longest consecutive pairings6
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure