Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGCCCTTGGGGCACAGTGG&CCACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTCGA
(((((((((((((((.((((((&)))))))))..............))))))........).))))).
Details
MiRNAhsa-miR-5008-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1243,1288
Score0.923
Seed1
Au0.618
Energy-19.4
Binding len45
Me-4.171
Phylopstem3.403973578947368
Phylopflank4.37862668375
Longest consecutive pairings9
Position of longest consecutive pairings36
Pairings in 3prime end7
PositionCDS
2D Structure