Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGTGCTCCCAGGGCCTCGC&GGGCAAGAAGAAAGTAATCAATCAAATAAGTCTGGGTCAGAGGATGAGATGAAAGAAGCAGATGAGAGCACAGGA
(((((((((.((..((.((..&.)).))...)).))))))))).
Details
MiRNAhsa-miR-5008-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1825,1900
Score0.846
Seed1
Au0.515
Energy-22.8
Binding len22
Me-7.326
Phylopstem5.497184444444445
Phylopflank4.1525400462499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure