Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTAAATCTGAAAGTCCAAAA&TGGGCTGCAGATGGTTGGAG
(((...(((((..((((((...&)))))).)))))....))).
Details
MiRNAhsa-miR-5009-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1435,1455
Score0.923
Seed0
Au0.603
Energy-17.7
Binding len20
Me-17.626
Phylopstem3.5522889999999996
Phylopflank2.7138454250000006
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure