Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTTTGTGTCTCCCATTCCCCAG&CTGATGACTGGAATGAAGACACGGATGGAGAATGGGAGGCACC
....(((((((((((((.(((.&.))).))))))))))))).
Details
MiRNAhsa-miR-5010-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1109,1152
Score0.846
Seed0
Au0.515
Energy-28.0
Binding len19
Me-9.547
Phylopstem3.6393174999999993
Phylopflank3.6022244699999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure