Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATATATACAGCCATGCACTC&TGTATGGTTGTTTGATTCTATCAACAATTGAAAGTGTTGTATATGA
((((((((((((((((((...&)))))))))))...........................))))))).
Details
MiRNAhsa-miR-5011-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2395,2441
Score0.846
Seed1
Au0.706
Energy-15.9
Binding len46
Me-3.938
Phylopstem3.0206432755555563
Phylopflank3.8307424649999997
Longest consecutive pairings11
Position of longest consecutive pairings35
Pairings in 3prime end5
Position3UTR
2D Structure