Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGTTTGTAGCTTTGCTGGCATG&CATGCCAGACCTGAACTTTAATCAGTCTGCACATCCT
((((.(((((((...((((((((&))))))))...............)).))))).)))).
Details
MiRNAhsa-miR-5087
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2010,2047
Score0.923
Seed0
Au0.632
Energy-21.0
Binding len37
Me-10.938
Phylopstem3.5507625000000003
Phylopflank3.2722487925
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end8
Position3UTR
2D Structure