Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACGGAGACGACAAGACTGTGCTG&CACAGTTTTAGTTGTTTG
....((((((((((((((((...&))))))))).))))))).
Details
MiRNAhsa-miR-5091
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2206,2224
Score0.923
Seed0
Au0.706
Energy-17.8
Binding len18
Me-9.547
Phylopstem3.5133632352941184
Phylopflank3.8553257275
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure