Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAAATGAGGCTGGCTAGGAGC&CTGCTGGCTGGCTTGATG
.....((.(((((((((((.((.&)).))))))))))).)).
Details
MiRNAhsa-miR-5093
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1052,1070
Score0.923
Seed0
Au0.618
Energy-20.8
Binding len18
Me-15.979
Phylopstem4.415114863636362
Phylopflank5.1881521125
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure