Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGATGAGGGATTGAAGTGGA&CTGCTGGCTGGCTTGATGATGAACCAAAATTTATCCCTGATCCTAA
((((((.((((((.....(((.&.)))......)))))).)))))).
Details
MiRNAhsa-miR-5187-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1052,1098
Score0.923
Seed0
Au0.603
Energy-22.3
Binding len24
Me-7.307
Phylopstem5.3578005
Phylopflank5.099515350000001
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure