Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATCGGACCCATTTAAACCGGAG&AGATGGGCCGATA
.(((((.(((((((.........&)))))))))))).
Details
MiRNAhsa-miR-5188
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1905,1918
Score1.0
Seed0
Au0.529
Energy-17.1
Binding len13
Me-6.306
Phylopstem2.487020857142857
Phylopflank4.583386989999999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure