Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCAGTGACTGAGCTGGAGCCA&TGGTTTGTACAGAACAAAATAATATGTAGCAGCTTCATTGCTATTGGAAAAATCAGTTATTGGA
(((((((((((((((((((..&.))))))..))...........))))))))))).
Details
MiRNAhsa-miR-5190
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2234,2298
Score0.923
Seed1
Au0.676
Energy-21.5
Binding len34
Me-3.938
Phylopstem4.41927025625
Phylopflank4.36773664125
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure